Conference Papers

  1. Chen X*, Qiu P*, Zhu W*, Li H, Wang H, Sotiras A, Wang Y, Razi A, TimeMIL: Advancing Multivariate Time Series Classification via a Time-Aware Multiple Instance Learning, 41st International Conference on Machine Learning (ICML), July 2024, Vienna, Austria
  2. Yang Z, Zhou M, Shan M, Wen B, Xuan Z, Hill M, Bai H, Qi G-J, Wang Y, OmniMotionGPT: Animal Motion Generation with Limited Data, In IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), June 2024, Seattle, WA.
  3. Zhu W, Qiu P, Chen X, Li X, Lepore N, Dumitrascu O, Wang Y, nnMobileNet: Rethinking CNN for Retinopathy Research, Data Curation and Augmentation in Enhancing Medical Imaging Applications Workshop (DCAMI), in conjunction with CVPR 2024, June 2024, Seattle, WA.
  4. Jalili-Mallak N, Tu Y, Lu Z-L, Wang Y, Enhancing 3T Retinotopic Maps Using Diffeomorphic Registration, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), May 2024
  5. Xiong Y, Zhu W, Lu Z-L, Wang Y, Reconstructing Retinal Visual Images from 3T fMRI Data Enhanced by Unsupervised Learning, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), May 2024 [oral]
  6. Yang Z, Su Y, Rouhi R, Farazi M, Zhu W, Chen Y, Reiman EM, Caselli RJ, Chen K, Wang Y, Lepore N, Pre-Training Graph Attention Convolution for Brain Structural Imaging Biomarker Analysis and Its Application to Alzheimer’s Disease Pathology Identification, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), May 2024 [oral]
  7. Yang Z, Ding K, Liu H, Wang Y, MGM-AE: Self-Supervised Learning on 3D Shape Using Mesh Graph Masked Autoencoders, IEEE Winter Conference on Applications of Computer Vision (WACV), Jan. 2024
  8. Yang Z, Ren M, Ding K, Gerig G, Wang Y, Keypoint-Augmented Self-Supervised Learning for Medical Image Segmentation with Limited Annotation, 37th Conference on Neural Information Processing Systems (NeurIPS), New Orleans, LA, Dec. 2023
  9. Rouhi R, Tanedo J, Wei I M, Valder M, Zanjal S, Gajawelli N, Nelson M, Deoni S, Wang Y, Linguraru M G, Lepore N, Automated Segmentation of the Hippoampus in Pediatric Imaging, 18th International Symposium on Medical Information Processing and Analysis (SIPAIM). Mexico City, Mexico. Nov., 2023
  10. Ye K, Tang H, Dai S, Guo L,  Liu J,  Wang Y, Leow A, Thompson PM, Huang H, Zhan L, Bidirectional Mapping with Contrastive Learning on Multimodal Neuroimaging Data, 26th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Vancouver, Canada Oct. 2023 [Oral]
  11. Zhu W, Qiu P, Chen X, Li H, Wang H, Leporé N, Dumitrascu OM, Wang Y, “Beyond MobileNet: An improved MobileNet for Retinal Diseases.” In Proceedings of the MICCAI Myopic Maculopathy Analysis Challenge 2023, Springer, 2023.
  12. Li H, Zhu W, Chen X, Wang, Y, “Prediction of Spherical Equivalent With Vanilla ResNet.” In Proceedings of the MICCAI Myopic Maculopathy Analysis Challenge 2023. Springer, 2023.
  13. Farazi M, Yang Z, Zhu W, Qiu P, Wang Y, TetCNN: Convolutional Neural Networks on Tetrahedral Meshes, Information Processing In Medical Imaging (IPMI), Jun. 2023 [Oral]
  14. Zhu W*, Qiu P*, Dumitrascu O, Sobczak J, Farazi M, Yang Z, Nandakumar K, Wang Y, OTRE: Where Optimal Transport Guided Unpaired Image-to-Image Translation Meets Regularization by Enhancing, Information Processing In Medical Imaging (IPMI), Jun. 2023
  15. Zhu W, Qiu P, Farazi M, Nandakumar K, Dumitrascu O, Wang Y, Optimal Transport Guided Unsupervised Learning for Enhancin Low-Quality Retinal Images, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2023
  16. Fu Y, Huang Y, Dong S, Wang Y, Yu T, Niu M, Zhuo C, SFCNEXT: A Simple Fully Convolutional Network for Effective Brain Age Estimation with Small Sample Size, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2023
  17. Xiong Y, Tu Y, Lu Z-L, Wang Y, Characterizing visual cortical magnification with topological smoothing and optimal transportation, SPIE Medical Imaging, Feb. 2023
  18. Farazi M, Zhu W, Yang Z, Wang Y, Anisotropic Multi-Scale Graph Convolutional Network for Dense Shape Correspondence, IEEE Winter Conference on Applications of Computer Vision (WACV), Jan. 2023
  19. Zhu W, Qiu P, Lepore N, Dumitrascu OM, Wang Y, Self-Supervised Equivariant Regularization Reconciles Multiple Instance Learning: Joint Referable Diabetic Retinopathy Classification and Lesion Segmentation, 18th International Symposium on Medical Information Processing and Analysis (SIPAIM). Campinas, Brazil. Nov., 2022.
  20. Fan D, Gajawelli N, Paulli A, Perry E, Tanedo J, Deoni S, Linguraru M, Wang Y, and Lepore N, NEC-NET : Segmentation and Feature Extraction Network for the Neurocranium in Early Childhood, 18th International Symposium on Medical Information Processing and Analysis (SIPAIM). Campinas, Brazil. Nov., 2022.
  21. Wu J, Su Y, Reiman EM, Caselli RJ, Chen K, Thompson PM, Wang J*, Wang Y*, Investigating the Effect of Tau Deposition and APOE on Hippocampal Morphometry in Alzheimer’s Disease: A Federated Chow Test Model, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Mar. 2022 [Oral]
  22. Fan Y, Wang Y, “Geometry-Aware Hierarchical Bayesian Learning on Manifolds,” IEEE Winter Conference on Applications of Computer Vision (WACV), Jan. 2022
  23. Wu J, Zhu W, Su Y, Gui J, Lepore N, Reiman EM, Caselli RJ, Thompson PM, Chen K, Wang Y, “Predicting Tau Accumulation in Cerebral Cortex with Multivariate MRI Morphometry Measurements, Sparse Coding, and Correntropy“, 17th International Symposium on Medical Information Processing and Analysis (SIPAIM), Campinas, Brazil, Nov. 2021
  24. Htite, ED., Gajawelli, N., Saint-Martin, C., Wei, M., Sarah, P., Wang, Y., Wintermark, P., Deoni, S., Lepore, N., Brossard-Racine, M. (2021). Altered hippocampal morphometry in infants born preterm. 17th International Symposium on Medical Information Processing and Analysis (SIPAIM). Campinas, Brazil. Nov., 2021. Platform Presentation. 
  25. Zhang M*, Guo Y*, Lei N, Zhao Z, Wu J, Xu X, Wang Y, Gu X, “Cortical Surface Shape Analysis based on Alexandrov Polyhedra“, IEEE International Conference on Computer Vision (ICCV), Virtual, Oct. 2021
  26. Yang Z, Wu J, Thompson PM, Wang Y, “Deep Learning on SDF for Classifying Brain Biomarkers“, 43rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), Nov. 2021
  27. Tu Y, Ta D, Lu Z-L, Wang Y, “Topological Receptive Field Model for Human Retinotopic Mapping“, 24th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Strasbourg, France, Oct. 2021
  28. Zhang M*, An D*, Lei N, Wu J, Zhao T, Xu Y, Wang Y, Gu X, Cortical Morphometry Analysis Based on Worst Transportation Theory, Information Processing In Medical Imaging (IPMI), Jun. 2021
  29. Wu J, Zhang J, Li Q, Su Y, Chen K, Reiman EM, Wang J, Lepore N, Ye J, Thompson PM, Wang Y, Patch-based surface morphometry feature selection with federated group lasso regression, 16th International Symposium on Medical Information Processing and Analysis (SIPAIM), Lima, Peru, Oct. 2020
  30. Mukherjee S Paquette N, Gajawelli N, Wang Y, Wallace J, Nelson MD, Panigrahy A, Lepore N, Deep-learning based tractography for neonates, 16th International Symposium on Medical Information Processing and Analysis (SIPAIM), Lima, Peru, Oct. 2020
  31. Fan Y, Wang Y, Convolutional Bayesian Models for Anatomical Landmarking on Multi-Dimensional Shapes, 23rd International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Lima, Peru, Oct. 2020
  32. Zhang W, Zhan L, Thompson PM, Wang, Y, “Deep Representation Learning For Multimodal Brain Networks“, 23rd International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Lima, Peru, Oct. 2020
  33. Tu Y, Ta D, Lu Z-L, Wang Y, “Optimizing Visual Cortex Parameterization with Error-Tolerant Teichmüller Map in Retinotopic Mapping“, 23rd International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Lima, Peru, Oct. 2020
  34. Tu Y, Ta D, Lu Z-L, Wang Y, “Diffeomorphic Smoothing for Retinotopic Mapping“, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2020 [Oral] (Best Paper Award Finalist)
  35. Tu Y, Ta D, Gu X, Lu Z-L, Wang Y, “Diffeomorphic Registration for Retinotopic Mapping via Quasiconformal Mapping“, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2020
  36. Zhang J, Wang Y, “Temporally Adaptive-Dynamic Sparse Network for Modeling Disease Progression“, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2020
  37. Farazi M, Zhan L, Lepore N, Thompson PM, Wang Y, “A Univariate Persistent Brain Network Feature Based on the Aggregated Cost of Cycles from the Nested Filtration Networks“, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2020
  38. Zhang W, Wang Y, “Deep Multimodal Brain Network Learning For Joint Analysis of Structural Morphometry and Functional Connectivity“, In IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Apr. 2020
  39. Zhang J, Zhang J, Ghosh S, Li D, Zhu J, Zhang H, Wang Y, “Regularize, Expand and Compress: NonExpansive Continual Learning,”, IEEE Winter Conference on Applications of Computer Vision (WACV), Mar. 2020 [Oral]
  40. Mi L, Zhang W, Wang Y, “Regularized Wasserstein Means for Aligning Distributional Data“, 34th AAAI Conference on Artificial Intelligence (AAAI-20), Feb. 2020 [Oral]
  41. Mi L, Zhang W, Wang Y, “Regularized Wasserstein Means for Aligning Distributional Data”, Optimal Transport & Machine Learning, a NeurIPS 2019 Workshop, Vancouver, Dec. 2019
  42. Fan Y, Lepore N, Wang Y, “Morphometric Gaussian Process for Landmarking on Grey Matter Tetrahedral Models“, 15th International Symposium on Medical Information Processing and Analysis (SIPAIM), Medellin, Colombia, Nov. 2019 [Oral]
  43. Zhang J, Wang Y, “Continually Modeling Alzheimer’s Disease Progression via Deep Multi-Order Preserving Weight Consolidation“, 22nd International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Shenzhen, China, Oct. 2019
  44. Zhang W, Wang Y, “Geometric Brain Surface Network For Brain Cortical Parcellation“, 1st International Workshop on Graph Learning in Medical Image (GLMI), in Conjunction with MICCAI, Oct. 2019 [Oral]
  45. Wen C, Lei N, Ma M, Qi X, Zhang W, Wang Y, Gu X, “Surface Foliation Based Brain Morphometry Analysis“, 7th MICCAI Workshop on Mathematical Foundations of Computational Anatomy, in Conjunction with MICCAI, Oct. 2019 [Oral]
  46. Dong Q*, Zhang J*, Li Q, Thompson PM, Caselli RJ, Ye J, Wang Y, “Multi-task Dictionary Learning based Convolutional Neural Networks for Longitudinal Clinical Score Prediction in Alzheimer’s Disease“,  Joint Workshop on Human Brain and Artificial Intelligence, in Conjunction with IJCAI, Aug. 2019 [Oral]
  47. Zhang W, Mi L, Thompson PM, Wang Y, “A Geometric Framework for Feature Mappings in Multimodal Fusion of Brain Image Data“, Information Processing In Medical Imaging (IPMI), Jun. 2019
  48. Paquette, N., Suri A, Ganesh B, Tsao S, Gaonkar B, Wang Y, Nelson M, Panigrahy A, and Lepore N, “Neonaral Brain MRI Cortical Segmentation via Geodesic Transforms”, in IEEE International Symposium on Biomedical Imaging (ISBI). 2019, IEEE: Venice, Italy
  49. Mi L, Zhang W, Gu X, Wang Y, “Variational Wasserstein Clustering“, European Conference on Computer Vision (ECCV), Munich, Germany, Sep. 2018
  50. Fan Y, Wang G, Lepore N, Wang Y, “A Tetrahedron-Based Heat Flux Signature for Cortical Thickness Morphometry Analysis“, 21st International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Granada, Spain, Sep. 2018
  51. Zhang W, Shu K, Wang S, Liu H, Wang Y, “Multimodal Fusion of Brain Networks with Longitudinal Couplings“, 21st International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Granada, Spain, Sep. 2018
  52. Zhang J, Wang X, Li D, Wang Y, “Dynamically Hierarchy Revolution: DirNet for Compressing Recurrent Neural Network on Mobile Devices”, IJCAI-ECAI-18, 2018 [Oral]
  53. Tu Y, Wen C, Zhang W, Wu J, Zhang J, Chen K, Caselli RJ, Reiman EM, Gu X, Wang Y,  “Isometry Invariant Shape Descriptors for Abnormality Detection on Brain Surfaces Affected by Alzheimer’s Disease“, 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC), 2018 [Oral]
  54. Wu J, Zhang J, Shi J, Chen K, Caselli RJ, Reiman EM, Wang Y, “Hippocampus Morphometry Study on Pathology-Confirmed Alzheimer’s Disease Patients with Surface Multivariate Morphometry Statistics“, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2018 [Oral]
  55. Zhang J, Tu Y, Li Q, Caselli RJ, Thompson PM, Ye J, Wang Y, “Multi-Task Sparse Screening for Predicting Future Clinical Scores Using Longitudinal Cortical Thickness Measures“, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2018
  56. Mi L, Zhang W, Zhang J, Fan Y, Goradia D, Chen K, Reiman EM, Gu X, Wang Y, “An Optimal Transportation based Univariate Neuroimaging Index“, IEEE International Conference on Computer Vision (ICCV), Venice, Italy, Oct. 2017
  57. Yu X, Lei N, Wang Y, Gu X, “Intrinsic 3D Dynamic Surface Tracking based on Dynamic Ricci Flow and Teichmuller Map“,  IEEE International Conference on Computer Vision (ICCV), Venice, Italy, Oct. 2017
  58. Singh S, Srivastava A, Mi L, Caselli RJ, Chen K, Goradia D, Reiman EM and Wang Y, “Deep Learning based Classification of FDG-PET Data for Alzheimer’s Disease Categories“, 13th International Symposium on Medical Information Processing and Analysis (SIPAIM), San Andres Island, Co.lombia, Oct. 2017 [Oral]
  59. Gajawelli N, Denoi S, Shi J, Dirks H, Linguraru MG, Nelson MD, Wang Y, Lepore N, Cranial Thickness Changes in Early Childhood, 13th International Symposium on Medical Information Processing and Analysis (SIPAIM), San Andres Island, Colombia, Oct. 2017
  60. Chou Z, Paquette N, Ganesh B, Wang Y, Ceschin R, Nelson MD, Macyszyn L, Gaonkar B, Panigrahy A, Lepore N, Bayesian automated cortical segmentation for neonatal MRI, Proc SPIE Int Soc Opt Eng, pp. 10572, 2017 
  61. Gajawelli N, Deoni S, Dirks H, Dean D, O’Muircheartaigh J, Wang Y, Nelson M, Coulon O, Lepore N, “Central Sulcus Development in Early Childhood“, the 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2017
  62. Vlasova R, Wang Y, Dirks H, Dean D, O’Muircheartaigh J, Gonzalez S, Nguyen BK, Nelson M, Deoni S, Lepore N, “Contribution to Speech Development of the Right Anterior  Putamen Revealed with Multivariate Tensor-based Morphometry“,the 39th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2017 
  63. Zhang J*, Li Q*, Caselli RJ, Thompson PM, Ye J, Wang Y, “Multi-Source Multi-Target Dictionary Learning for Prediction of Cognitive Decline“, In Information Processing In Medical Imaging (IPMI), 2017
  64. Zhang J, Fan Y, Li Q, Thompson PM, Ye J, Wang Y, “Empowering Cortical Thickness Measures in Clinical Diagnosis of Alzheimer’s Disease with Spherical Sparse Coding“, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2017 [Oral]
  65. Zhang W, Shi J, Yu J, Zhan L, Thompson PM, Wang Y, “Enhancing Diffusion MRI Measures by Integrating Grey and White Matter Morphometry with Hyperbolic Wasserstein Distance“, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2017
  66. Vlasova R, Gajawelli N, Wang Y, Dirks H, Dean D, O’Muircheataigh J, Lao Y, Yoon J, Nelson M D, Deoni S, Lepore N, “Putamen development in children 12 to 21 months old“, Proc. SPIE 10160, 12th International Symposium on Medical Information Processing and Analysis (SIPAIM), Tandil, Argentina, Dec. 2016
  67. Chai, Y, Lao Y, Li Y, Ji C, O’Neil S, Wang Y, Lepore N, Wood J, “Multivariate surface-based analysis of corpus callosum in patients with sickle cell disease“, Proc. SPIE 10160, 12th International Symposium on Medical Information Processing and Analysis (SIPAIM), Tandil, Argentina, Dec. 2016
  68. Zhang J, Shi J, Stonnington C, Li Q, Gutman BA, Chen K, Reiman EM, Caselli RJ, Thompson PM, Ye J, Wang Y, Hyperbolic Space Sparse Coding with Its Application on Prediction of Alzheimer’s Disease in Mild Cognitive Impairment, 19th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Athens, Greece, Oct. 2016
  69. Li, Q, Yang T, Zhan, L, Hibar D, Jahanshad N, Wang Y, Ye J, Thompson PM, Wang J, “Large-scale Collaborative Imaging Genetics Studies of Risk Genetic Factors for Alzheimer’s Disease Across Multiple Institutions“, 19th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI, Athens, Greece, Oct. 2016
  70. Shi J, Zhang W, Wang Y, Shape Analysis with Hyperbolic Wasserstein Distance, In IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), 2016, Las Vegas, NV.
  71. Zhang J, Stonnington C, Li Q, Shi J, Bauer III RJ, Gutman B, Chen K, Reiman EM, Thompson PM, Ye J, Wang Y, Applying sparse coding to surface multivariate tensor-based morphometry to predict future cognitive decline, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2016 [Oral]
  72. Zhang W, Shi J, Stonnington C, Bauer III RJ, Gutman B, Chen K, Thompson PM, Reiman EM, Caselli RJ, Wang Y, Morphometric Analysis of Hippocampus and Lateral Ventricle Reveals Regional Difference Between Cognitively Stable and Declining Persons, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2016. [Best Student Paper Award Finalist]
  73. Li Y, Wang J, Yang T, Chen J, Liu L, Zhan L, Hibar DP, Jahanshad N, Wang Y, Zhao S, Thompson PM, Ye J, “Identification of Alzheimer’s Disease Risk Factors by Tree-Structured Group Lasso Screening”, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro (ISBI). 2016.
  74. Shi J, Wang Y, Lao Y, Zeschin R, Mi L, Nelson MD, Panigrahy A, Leporé N, “Abnormal Ventricular Development in Preterm Neonates with Visually Normal MRIs”, 11th International Symposium on Medical Information Processing and Analysis (SIPAIM), Nov. 2015, Cuenca, Ecuador
  75. Gajawellia N, Deonic S, Shi J, Xu, L, Dirks, H, Dean D, O’Muircheartaigh, Sawardekar S, Ezis A, Nelson MD, Wang Y, Leporé N, “Changes in Neurocranium Thickness in Early Childhood”, 11th International Symposium on Medical Information Processing and Analysis (SIPAIM), Nov. 2015, Cuenca, Ecuador
  76. Wang G, Wang Y, “ Multi-scale Heat Kernel based Grey Matter Morphology Signature“, 18th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2015, Munich Germany, Oct. 2015
  77. Ta D, Shi J, Barton B, Brewer A, Lu Z-L, Wang Y, “Characterizing Human Retinotopic Mapping with Conformal Geometry: Conformal Distortion Analysis”, the 8th International Workshop on High Performance Computing for Biomedical Image Analysis (HPC-MICCAI), 2015
  78. Su Z, Zeng W, Wang Y, Lu Z-L, Gu X, “ Shape Classification using Wasserstein Distance for Brain Morphometry Analysis“, Information Processing in Medical Imaging, International Conference (IPMI), Proceedings, pp. 411-423, Isle Of Skye, Scotland, June, 2015
  79. Gajawelli N, Deoni SCL, Dirks H, Dean D, O’Muircheartaigh J, Sawardekar S, Ezis A, Wang Y, Nelson M, Coulon O, Leporé N, “Characterization of the central sulcus in the brain in early childhood”, 37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Milano, Italy, Aug. 2015.
  80. Yang T, Wang J, Sun Q, Hibar DP, Jahanshad N, Liu L, Wang Y, Zhan L, Thompson PM, Ye J, “Detecting Genetic Risk Factors for Alzheimer’s Disease in Whole Genome Sequence Data via Lasso Screening.” In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro. 2015.
  81. Wade BSC, Valcour V, Wendelken-Riegelhaup L, Esmaeili-Firidouni P, Joshi SH, Wang Y, Thompson PM , “Mapping Abnormal Subcortical Brain Morphometry In An Elderly HIV+ Cohort”, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro. 2015.
  82. Gutman B, Jahanshad N, Ching CRK, Wang Y, Kochunov P, Nichols T, Thompson PM, “Medial Demons Registration Localizes the Degree of Genetic Influence over Subcortical Shape Variability: An N=1480 Meta-Analysis”, In IEEE International Symposium on BIOMEDICAL IMAGING: From Nano to Macro. 2015.
  83. Wade BSC, Valcour V, Busovaca E, Esmaeli-Firidouni P, Joshi SH, Wang Y, Thompson PM, “Subcortical shape and volume abnormalities in an elderly HIV+ cohort”, SPIE, Medical Imaging, 2015
  84. Lao Y, Law M, Shi J, Gajawelli N, Haas L, Wang Y and Leporé N, “A T1 and DTI fused 3D Corpus Callosum analysis in pre- vs. post-season contact sports players“, 10th International Symposium on Medical Information Processing and Analysis (SIPAIM), Oct. 2014, Cartagena,Colombia
  85. Shi J, Stonnington CM, Thompson PM, Chen K, Gutman BA, Reschke C, Baxter LC, Reiman EM, Caselli RJ, Wang Y, ADNI Group, “Hyperbolic Ricci Flow and Geodesic Curve Lifting for Consistent Ventricular Surface Registration“, the 7th International Workshop on High Performance Computing for Biomedical Image Analysis (HPC-MICCAI), 2014
  86. Zhan L, Nie Z, Ye J, Wang Y, Jin Y, Jahanshad N, Prasad G, de Zubicaray GI, McMahon KL, Martin NG, Wright MJ, Thompson PM, “Multiple stages classification of Alzheimers disease based on structural brain networks using Generalized Low Rank Approximations (GLRAM)“, MICCAI 2014 Workshop on Computational Diffusion MRI (CDMRI14), 2014
  87. Ta D, Shi J, Barton B, Brewer A, Lu Z-L, Wang Y, “Characterizing Human Retinotopic Mapping with Conformal Geometry: A Preliminary Study“, SPIE, Medical Imaging, 2014
  88. Lao Y, Gajawelli N, Hass L, Wilkins B, Hwang D, Tsao S, Wang Y Law M, Leporé N “3D pre- versus post-season comparisons of surface and relative pose of the corpus callosum in contact sport athletes“, SPIE, Medical Imaging, 2014
  89. Yepes-Calderon F, Pedregosa F, Thirion B, Wang Y*, Leporé N*, “Automatic Pathology Detection by Means of Stored Data Using Machine-Learning Support Vector Machines“, SPIE, Medical Imaging, 2014
  90. Tsao S, Gajawelli N, Zhou J, Shi J, Ye J, Wang Y, Leporé N, “Evaluating the Predictive Power of Multivariate Tensor-based Morphometry in Alzheimer’s Disease Progression via Convex Fused Sparse Group Lasso“, SPIE, Medical Imaging, 2014
  91. Xu L, Collignon O, Wang G, Kang Y, Leporé F, Shi J, Lao Y, Joshi A, Leporé N*, Wang Y*, “Combining Thickness Information with Surface Tensor-based Morphometry for the 3D Statistical Analysis of the Corpus Callosum“, the 4th MICCAI Workshop on Mathematical Foundations of Computational Anatomy (MFCA), 2013.
  92. Joshi S, Shi J, Wang Y, Narr K, Toga A, Woods R, “Surface Shape Matching and Analysis using Intrinsic Coordinate Parameterizations“, the 4th MICCAI Workshop on Mathematical Foundations of Computational Anatomy (MFCA). 2013
  93. Lao Y, Shi J, Wang Y, Ceschin R, Hwang D, Nelson MD, Panigrahy A, Leporé N, “Statistical Analysis of Relative Pose of the Thalamus in Preterm Neonates“, MICCAI workshop on CLinical Imagebased Procedures (CLIP 2013): Translational Research in Medical Imaging. 2013.
  94. Wang G, Zhang X, Su Q, Chen J, Wang L, Ma Y, Liu Q, Xu L, Shi J, Wang Y, “A Heat Kernel based Cortical Thickness Estimation Algorithm“, the 3rd MICCAI Workshop on Multimodal Brain Image Analysis (MBIA), 2013.
  95. Xiang S, Yuan L, Fan W, Wang Y, Thompson PM, Ye J, “ Multi-Source Learning with Block-wise Missing Data For Alzheimer’s Disease Prediction“, The 19th ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (SIGKDD 2013), pp. 185-193, (Full Presentation)
  96. Shi R, Zeng W, Su Z, Damasio H, Lu Z, Wang Y, Yau S.-T. Gu X, Hyperbolic Harmonic Mapping for Constrained Brain Registration, IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), pp. 2531-2538, Portland, Oregan, June, 2013 [Oral]
  97. Su Z, Zeng W, Shi R, Wang Y, Sun J, Gu X, Area Preserving Brain Mapping, IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), pp. 2235-2242, Portland, Oregan, June, 2013
  98. Shi R, Zeng W, Su Z, Wang Y, Damasio H, Lu Z, Yau S.-T. Gu X, Hyperbolic Harmonic Brain Surface Registration with Curvature-based Landmark Matching, Information Processing in Medical Imaging, 23rd International Conference (IPMI), Proceedings, pp. 159-170, Asilomar, CA, June, 2013
  99. Shi J, Wang Y, Ceschin R, An X, Nelson MD, Panigrahy A, Leporé N , Surface Fluid Registration and Multivariate Tensor-based Morphometry in NewBorns – the Effects of Prematurity on the Putamen, Asia-Pacific Signal and Information Processing Association Annual Summit and Conference (APSIPA ASC), Hollywood, CA, Dec. 2012
  100. Shi J, Thompson PM, Wang Y, Hyperbolic Ricci Flow and Its Application in Studying Lateral Ventricle Morphometry, MICCAI Workshop: International Workshop on Multimodal Brain Image Analysis (MBIA), Nice, France, Oct. 2012
  101. An X, Liu Z, Shi Y, Li N, Wang Y, Joshi S, “Modeling Dynamic Cellular Morphology in Images”, the 15th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2012, Nice, France, Oct. 2012, Proceedings, Part I. pp. 340-347
  102. Wang Y, Panigrahy A, Shi J, Ceschin R, Nie Z, Nelson MD, Leporé N, “3D vs. 2D Surface Shape Analysis of the Corpus Collosum in Premature Neonates”, MICCAI: Workshop on Paediatric and Perinatal Imaging, Nice, France, Oct. 2012
  103. Zhan L, Wang Y, Thompson PM, “Registration of Spherical Functions from High Angular Resolution Diffusion Imaging using the Heat Kernel Signature and Möbius Transformation”, MICCAI: Workshop on Computational Diffusion MRI”, Nice, France, Oct. 2012 (Oral)
  104. Yuan L, Wang Y, Thompson PM, Narayan VA, Ye J, “Multi-Source Learning for Joint Analysis of Incomplete Multi-Modality Neuroimaging Data”, accepted by The 18th ACM SIGKDD International Conference On Knowledge Discovery and Data Mining (SIGKDD 2012), (Full Presentation)
  105. Nandakumar V, An X, Wang Y, Johnson R, Meldrum D, “Conformal Mapping of Nuclei in 3D Tomographic Cell Images to Assess Shape Heterogeneity”, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Barcelona, Spain, 2012, pp. 222-225
  106. Gutman B, Wang Y, Rajagopalan P, Toga AW, Thompson PM, “Shape Matching with Medial Curves and 1-D Group-Wise Registration”, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Barcelona, Spain, 2012, pp. 716-719
  107. Shi J, Thompson PM, Wang Y, “Human Brain Mapping with Conformal Geometry and Multivariate Tensor-based Morphometry”, MICCAI Workshop: International Workshop on Multimodal Brain Image Analysis (MBIA), 2011:Toronto, Canada. (Invited Paper)
  108. Wang Y, Panigrahy A, Shi J, Ceschin R, Nelson MD, Gutman B, Thompson PM, Leporé, N, “Surface Multivariate Tensor-based Morphometry on Premature Neonates: A Pilot Study”, MICCAI Workshop: Image Analysis of Human Brain Development (IAHBD), 2011:Toronto, Canada.
  109. Shi J, Wang Y, Thompson PM, Wang Y, “Hippocampal Morphometry Study by Automated Surface Fluid Registration and Its Application to Alzheimer’s Disease”, 3rd MICCAI Workshop on Mathematical Foundations of Computational Anatomy (MFCA), 2011:Toronto, Canada.
  110. Zeng W, Shi R, Wang Y, Gu X, “Teichmüller Shape Descriptor and Its Application to Alzheimer’s Disease Study”, 3rd MICCAI Workshop on Mathematical Foundations of Computational Anatomy (MFCA), 2011:Toronto, Canada.
  111. Wang Y, Chan TF, Toga AW, Thompson PM, “Shape Analysis with Multivariate Tensor-based Morphometry and Holomorphic Differentials”, 12th IEEE International Conference on Computer Vision (ICCV), Kyoto, Japan, Sep. 2009, pp. 2349-2456
  112. Wang Y, Dai W, Chou Y, Gu X, Chan TF, Toga AW, Thompson PM, “Studying Brain Morphometry using Conformal Equivalence Class”, 12th IEEE International Conference on Computer Vision (ICCV), Kyoto, Japan, Sep. 2009, pp. 2365-2372
  113. Wang Y, Chan TF, Toga AW, Thompson PM, “Multivariate Tensor-based Brain Anatomical Surface Morphometry via Holomorphic One-Forms”, 12th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2009, London, UK, Sep. 2009, pp. 337-344
  114. Wang Y, Dai W, Gu X, Chan TF, Yau S-T, Toga AW, Thompson PM, “Teichmüller Shape Space Theory and Its Application to Brain Morphometry”, 12th International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2009, London, UK, Sep. 2009, pp. 133-140
  115. Wang Y, Gu X, Chan TF, Thompson PM , “Shape Analysis with Conformal Invariants for Multiply Connected Domains and its Application to Analyzing Brain Morphology”, IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), Miami Beach, FL, USA, Jun. 2009, pp. 202-209
  116. Wang Y, Zhang J, Chan TF, Toga AW, Thompson PM , “ Multivariate Tensor-based Morphometry on Surfaces: Application to Mapping Ventricular Changes in HIV/AIDS“, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Boston, MA, USA, 2009, pp. 129-132
  117. Dong B, Mao Y, Dinov ID, Tu Z, Shi Y,Wang Y, Toga AW, “Wavelet-Based Representation of Biological Shapes“, International Symposium on Visual Computing (ISVC), Part I, Las Vegas, NV, USA, 2009, pp. 955-964
  118. Wang Y, Gu X, Chan TF, Thompson PM, Yau S-T, “Conformal Slit Mapping and Its Applications to Brain Surface Parameterization“, International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2008, LNCS 5241, pp. 585-593
  119. Wang Y, Gu X, Chan TF, Thompson PM, Yau S-T, “ Brain surface conformal parameterization with the slit mapping, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Paris, France, 2008, pp. 448-451
  120. Wang Y, Yin X, Zhang J, Gu X, Chan TF, Thompson PM, Yau S-T, Brain Mapping with the Ricci Flow Conformal Parameterization and Multivariate Statistics on Deformation Tensors, 2nd MICCAI Workshop on Mathematical Foundations of Computational Anatomy, pp. 36-47, 2008
  121. Lui LM, Thiruvenkadam S, Wang Y, Chan TF, Thompson PM, Optimized Conformal Parameterization of Cortical Surfaces Using Shape Based Matching of Landmark Curves, International Conference on Medical Image Computing and Computer Assisted Intervention – MICCAI 2008, LNCS 5241, pp. 494-502
  122. Gutman B, Wang Y, Chan TF, Thompson PM, Toga AW, Shape Registration with Spherical Cross Correlation, 2nd MICCAI Workshop on Mathematical Foundations of Computational Anatomy, pp. 56-67
  123. Gutman B, Wang Y, Morra J, Thompson PM, Toga AW, Disease Classification with Hippocampal Shape Invariants, MICCAI 2008 Workshop on the Computational Anatomy and Physiology of the Hippocampus, pp. 76-86
  124. Wang Y, Gu X, Chan TF, Thompson PM and Yau S-T, “ Brain Surface Conformal Parameterization with the Ricci Flow“, IEEE International Symposium on Biomedical Imaging – From Nano to Macro (ISBI), Washington D.C., USA, 2007, pp. 1312-1315
  125. Gutman B, Wang Y, Lui LM, Chan TF, Thompson PM, “ Hippocampal Surface Discrimination via Invariant Descriptors of Spherical Conformal Maps“, IEEE International Symposium on Biomedical Imaging – From Nano to Macro (ISBI), Washington D.C., USA, 2007, pp. 1316-1319
  126. Wang Y, Gu X, Chan TF, Toga AW, Thompson PM and Yau S-T, “Brain Surface Conformal Parameterization with Algebraic Functions“, International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2006, LNCS 4191, pp. 946-954
  127. Lui LM, Wang Y, Chan TF, and Thompson PM, “ A Landmark-based Brain Conformal Parametrization with Automatic Landmark Tracking Technique“, International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI), 2006, LNCS 4191, pp. 308-316
  128. Gutman B, Wang Y, Lui LM, Chan TF, and Thompson PM , “ Hippocampal Surface Analysis Using Spherical Harmonic Function Applied to Surface Conformal Mapping “, 8th International Conference on Pattern Recognition (ICPR), Hong Kong, China, 2006, Vol. 3, pp. 964-967
  129. Lui LM, Wang Y, Chan TF and Thompson PM, “Automatic Landmark Tracking and Its Application to the Optimization of Brain Conformal Mapping“, IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR), New York, NY, Jun. 2006, Vol. 2, pp. 1784-1792
  130. Lui LM, Wang Y, Chan TF and Thompson PM, “Automatic Landmark Tracking Applied to Optimize Brain Conformal Mapping“, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Arlington, VA, Apr. 2006, pp. 205-208
  131. Wang Y, Jo I, Wong S, Yau S-T, Chan TF, “ Segmentation and Tracking of 3D Neuron Microscopy Images using a PDE based Method and Connected Component Labeling Algorithm“, Life Science Systems and Applications Workshop, IEEE/NLM, Bethesda, MD, USA, Jul. 2006, pp. 72-73
  132. Wang Y, Chiang M-C, and Thompson PM, “Mutual Information-based 3D Surface Matching with Applications to Face Recognition and Brain Mapping“, 10th IEEE International Conference on Computer Vision (ICCV), Beijing, China, Oct. 2005, pp. 527-534
  133. Wang Y, Gu X, Hayashi KM, Chan TF, Thompson PM and Yau S-T, “Surface Parameterization using Riemann Surface Structure“, 10th IEEE International Conference on Computer Vision (ICCV), Beijing, China, Oct. 2005, pp. 1061-1066
  134. Lui LM, Wang Y, Chan TF, “ PDE on manifold using global conformal parametrization“, Variational, Geometric, and Level Set Methods in Computer Vision: Third International Workshop, VLSM 2005, Beijing, China, Oct. 16, 2005, pp. 307-319
  135. Wang Y, Chiang M-C, and Thompson PM, “Automated Surface Matching using Mutual Information Applied to Riemann Surface Structures“, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2005: 8th International Conference, Palm Springs, CA, USA, Oct. 26-29, 2005, Proceedings, Part II, pp. 666-674
  136. Wang Y, Gu X, Hayashi KM, Chan TF, Thompson PM and Yau S-T, “Brain Surface Parameterization using Riemann Surface Structure“, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2005: 8th International Conference, Palm Springs, CA, USA, Oct. 26-29, 2005, Proceedings, Part II, pp. 657-665
  137. Wang Y, Lui LM, Chan TF and Thompson PM, “Optimization of Brain Conformal Mapping with Landmarks“, Medical Image Computing and Computer-Assisted Intervention – MICCAI 2005: 8th International Conference, Palm Springs, CA USA, Oct. 26-29, 2005, Proceedings, Part II, pp. 675-683
  138. Wang Y, Chiang M-C, and Thompson PM, “3D Surface Matching with Mutual Information and Riemann Surface Structures“, Proceedings of the Eighth IASTED International Conference on Computer Graphics and Imaging (CGIM), Honolulu, HI, USA, Aug. 2005, pp. 94-99
  139. Wang Y, Gu X, Hayashi KM, Chan TF, Thompson PM and Yau S-T, “Brain Surface Conformal Parameterization“, Proceedings of the Eighth IASTED International Conference on Computer Graphics and Imaging (CGIM), Honolulu, HI, USA, Aug. 2005, pp. 76-81
  140. Wang Y, Lui LM, Chan TF and Thompson PM, “Combination of Brain Conformal Mapping and Landmarks: A Variational Approach“, Proceedings of the Eighth IASTED International Conference on Computer Graphics and Imaging (CGIM), Honolulu, HI, USA, Aug. 2005, pp. 70-75
  141. Jin M, Wang Y, Yau S-T and Gu X, “Optimal Global Conformal Surface Parameterization for Visualization“, IEEE Visualization, Austin, TX, Oct. 2004, pp. 267-274
  142. Wang Y, Gu X, Chan TF, Thompson PM and Yau S-T “ Volumetric Harmonic Brain Mapping“, IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI), Washington D.C., Apr. 2004, pp. 1275-1278
  143. Wang Y, Gu X, Chan TF, Thompson PM and Yau S-T, “ Intrinsic Brain Surface Conformal Mapping using a Variational Method“, Medical Imaging 2004: Image Processing, J. M. Fitzpatrick and M. Sonka (Eds.) Proceedings of SPIE, Vol. 5370, 2004, pp. 241-252
  144. Gu X, Wang Y, Chan TF, Thompson PM and Yau S-T, “ Genus Zero Surface Conformal Mapping and Its Application to Brain Surface Mapping“, C. Taylor and J. Alison Noble (Eds.), Information Processing in Medical Imaging,18th International Conference, IPMI 2003, Ambleside, UK, July 2003. Proceedings, pp. 172-184
  145. Gu X, Wang Y, and Yau S-T, “ Multiresolution Computation of Conformal Structures of Surfaces“, International Conference on Computer, Communication and Control Technologies: CCCT ’03. This paper won the best paper award in the session: Computing Technologies. 
  146. Wang Y, Phillips IT and Haralick RM, “ A Study on the Document Zone Content Classification Problem“, D. Lopresti, Hu J, and R. Kashi (Eds.), Document Image Analysis System V, 5th International Workshop DAS 2002, Princeton, NJ, USA, Aug. 2002. Proceedings, pp. 212 – 223.
  147. Wang Y and Hu J, “ Detecting Tables in HTML Documents“, D. Lopresti, Hu J, and R. Kashi (Eds.), Document Image Analysis System V, 5th International Workshop DAS 2002, Princeton, NJ, USA, Aug. 2002. Proceedings, pp. 249 – 260. This paper won the best student paper award.
  148. Wang Y, Phillips IT and Haralick RM, “ Table Detection Via Probability Optimization“, D. Lopresti, Hu J, and R. Kashi (Eds.), Document Image Analysis System V, 5th International Workshop DAS 2002, Princeton, NJ, USA, Aug. 2002. Proceedings, pp. 272 – 282.
  149. Wang Y, Phillips IT and Haralick RM, “ A Method for Document Zone Content Classification“, 16th International Conference on Pattern Recognition, ICPR2002, Vol. 3, pp. 196 – 199, Quebec City, Canada, Aug. 2002.
  150. Wang Y and Hu J “ A Machine Learning Based Approach for Table Detection on The Web“, The Eleventh International World Web Conference, WWW2002, pp. 242-250, Hawaii, USA, May 2002.
  151. Wang Y, Phillips IT and Haralick RM, “ Automatic Table Ground Truth Generation and A Background-analysis-based Table Structure Extraction Method“, Sixth International Conference on Document Analysis and Recognition , pp. 528-532, Seattle, Washington, U.S.A. Sep. 10-13, 2001. A web pagewas created as a supplement for it.
  152. Wang Y, Haralick RM and Phillips IT, “ Zone Content Classification and Its Performance Evaluation“, Sixth International Conference on Document Analysis and Recognition , pp. 540-544, Seattle, Washington, U.S.A. Sep. 10-13, 2001
  153. Wang Y, Phillips IT and Haralick RM, “ Using Area Voronoi Tessellation to Segment Characters Connected to Graphics“, Workshop on Graphics Recognition (GREC2001), Kingston, Ontario, Canada. Sep. 2001
  154. Wang Y, Phillips IT and Haralick RM, “ Random Table and Its Ground Truth Automatic Generation: A Tool for Table Understanding Research“, Workshop on Document Layout Interpretation and its Applications (DLIA2001), Seattle, Washington, U.S.A. Sep. 2001
  155. Wang Y, Haralick RM and Phillips IT, “Improvement of Zone Content Classification by Using Background Analysis“, Fourth IAPR International Workshop on Document Analysis Systems, Rio de Janeiro, Brazil, 10-13 December, 2000
  156. Wang Y, Phillips IT and Haralick RM, “ Statistical-based Approach to Word Segmentation“, 15th International Conference on Pattern Recognition, ICPR2000, Vol. 4, pp.555-558, Barcelona, Spain, September 2000.
  157. Aksoy S, Ye M, Schauf ML, Song M, Wang Y, Haralick RM, and et al., “Algorithm Performance Contest“, 15th International Conference on Pattern Recognition, ICPR 2000, vol. 4, pp. 870-876. Barcelona, Spain, Sep. 2000.
  158. Wang Y, Phillips IT and Haralick RM, “ From Image to SGML/XML Representation: One Method“, International Workshop on Document Layout Interpretation and Its Applications (DLIA’99), Bangalore, India, September 1999
  159. Wang Y, Tang L, etc. “ A New Method to Recognize Dimension Set and its Application in Architectural Engineering Drawings“, Fifth International Conference on Computer Aided Design and Computer Graphics, Dec. 2~5, 1997, Shenzhen China